Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831991.1_cds_XP_016504736.1_18142
CDS Infomation

[gene=LOC107822691] [db_xref=GeneID:107822691] [protein=transcription factor bHLH49-like isoform X2] [protein_id=XP_016504736.1] [location=complement(join(8997..9031,9117..9204,9320..9523,9627..9698,10072..10140,10249..10314,10403..10612,10731..11567))] [gbkey=CDS]
Sequence

ATGGATATGGTTAGCAAGGATGATGCCGAGTCAGAAAAGAGGTGTGAGGATGCTTTGAAC
TTCCAATCACCAAATATGTCATCGGATTGGCAATTAAGCGGCACCAATTTGACTAATGCA
TCCATTGGGATGGTTTCGAATAGCAATCCAACGGTAGATTCGTTCTGTGCTAGTGTTTGG
GATCATCCGACCAGTTTATCAAACTTAGGCTTAAGTGATACTAATATTCAGATGAATCAT
GGCACTACAAATGCACTAGACCCCCTGAGAACTAATGTTAATAGAATGCTTGGTATGAGT
CGGGCTCAACCAAATGCAATATCGTTGAAAGGGGGCACATTTGTACCCCCTACTCCTGGT
ATGCTTCCTCAGAGCTTATCTCAGTTTCCAGCTGATTCAGGTTTTATTGAGAGAGCTGCA
AGATTTTCATGCTTCAGTGGAGGAAAAGTTGGTGATATGATGAACCCCTTTACCGTCCCT
AATTCTCCTAATATGTATCCTAATGGACTGGCCTTGCATCGGCCACAGGAGGTTTTCGCT
AGTAAAGGCTTGCAGTCACCTTCTGCTGCAATCAGTGAGAAGCAGCACACAGGAAATGTG
GTTGAAAGTTCTGAGGATGTTTGTTTACCTCTTGAAAATGGTGCCATAGATAGAAGCCGC
CTCAAGAATGAGAAAAATGAAAGCTTTGCTAGGTCTCGGGATGAAGCAAAGGAATGTGTT
GGCATCCCCGGAAACGAGTCTGATGAGGCTGAATGTAGCAGCCATCAAGAAGAAGTGGAG
GGTAAGGATTCTTCTGCTAGGAGCCTTGGCTCAAAGAAAAGGAAAAGAAGTGGTCAGGAT
ACAGAATTTGATCAAACGAAGGGAGCACAACAACCACCAGCTGAACCGACAAAAGATCAA
ACAGAAATTCAGAAGGGAGAGCAAAACAGGCTTGGTGGAAAGAATAGTAAACAGGGGTCT
CAATCGGCGGATCCACCTAAAGAAGAATACATACACATTCGAGCTCGAAGAGGCCAGGCA
ACAAATAGCCATAGTCTTGCAGAAAGACTAAGGAGGGAGAAGATCAGTGAACGGATGAAA
TATCTTCAGGATCTTGTACCTGGTTGCAACAAGGTCACTGGGAAAGCAGTAATGCTGGAT
GAAATCATTAATTATGTACAATCTCTTCAAAGACAGGTGGAGTTCCTCTCAATGAAGCTT
GCAACGATAAACCCGCGTCTGGATTTTAATATTGATGGGCTCCTTGCAAAAGATATTTTC
CATTCACGAACGGTTCCTTCTTCGTCACTTGCTTTTGCTCCTGATATGACAATGCCATAT
CACTCCTCGCAACAACTGCAACCCGGCCTACTTCAGTCAGGTCTTCCTGGTTTAGGAAAC
TCTACCAATGCACTTCTTAGGTCGATCTATCCCCATTTATCCGCAACTAGTGGTGGCTAC
AAAGAGTCTTCATCTCAGTTGCCTAATATATGGGATGATGAGCTACATAATGTTGTCGAG
ATGGGTCTCAGTACAAGTCCGCCCCTCCATAGTCAAGATTTAAGTGGTTCTCTGCCATCA
GGCCAGATGAAAGAACTTTGA

Peptide Sequence

PEP ID

XP_016504736.1
PEP Infomation

PREDICTED: transcription factor bHLH49-like isoform X2 [Nicotiana tabacum]
Sequence

MDMVSKDDAESEKRCEDALNFQSPNMSSDWQLSGTNLTNASIGMVSNSNPTVDSFCASVW
DHPTSLSNLGLSDTNIQMNHGTTNALDPLRTNVNRMLGMSRAQPNAISLKGGTFVPPTPG
MLPQSLSQFPADSGFIERAARFSCFSGGKVGDMMNPFTVPNSPNMYPNGLALHRPQEVFA
SKGLQSPSAAISEKQHTGNVVESSEDVCLPLENGAIDRSRLKNEKNESFARSRDEAKECV
GIPGNESDEAECSSHQEEVEGKDSSARSLGSKKRKRSGQDTEFDQTKGAQQPPAEPTKDQ
TEIQKGEQNRLGGKNSKQGSQSADPPKEEYIHIRARRGQATNSHSLAERLRREKISERMK
YLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATINPRLDFNIDGLLAKDIF
HSRTVPSSSLAFAPDMTMPYHSSQQLQPGLLQSGLPGLGNSTNALLRSIYPHLSATSGGY
KESSSQLPNIWDDELHNVVEMGLSTSPPLHSQDLSGSLPSGQMKEL

Transcript Sequence

Gene sequence data has not been registered.